BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021D05LP1|AL427753
(542 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig703 1065 0.0
>3x_Contig703
Length = 2482
Score = 1065 bits (536), Expect = 0.0
Identities = 538/540 (99%)
Strand = Plus / Minus
Query: 3 gagcttggctctcttatgttacctygaatcttagattctatttataactgaaagaatgca 62
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2329 gagcttggctctcttatgttaccttgaatcttagattctatttataactgaaagaatgca 2270
Query: 63 acaagagataccttggacttttttgaatgggttttcattcaaattttatatccttatata 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2269 acaagagataccttggacttttttgaatgggttttcattcaaattttatatccttatata 2210
Query: 123 tataaattcatatatcgatatacaggtacatatagtttcttgccgggctgccgtaatagc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2209 tataaattcatatatcgatatacaggtacatatagtttcttgccgggctgccgtaatagc 2150
Query: 183 acactaagcctgttcctaagaagaagctgtactatctcctctgtttattccacctttcgc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2149 acactaagcctgttcctaagaagaagctgtactatctcctctgtttattccacctttcgc 2090
Query: 243 agaatgcgcctcgagaaatttcggttgagaattttttcagcaattacccaattggggcaa 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2089 agaatgcgcctcgagaaatttcggttgagaattttttcagcaattacccaattggggcaa 2030
Query: 303 aagcgatgtttaaaaaaaggcgtcaaagaggaagcatttttcgtagctttccaacaacac 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2029 aagcgatgtttaaaaaaaggcgtcaaagaggaagcatttttcgtagctttccaacaacac 1970
Query: 363 atcacagagcttggagttgagtacgcagttcttggccgttctccccgcaacaaatggcgc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1969 atcacagagcttggagttgagtacgcagttcttggccgttctccccgcaacaaatggcgc 1910
Query: 423 agatatctatgcaaataaacttgtgattgtttcttaggcttcctatataggaaataaaaa 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1909 agatatctatgcaaataaacttgtgattgtttcttaggcttcctatataggaaataaaaa 1850
Query: 483 tacatgaatgggggggtcaaccagtgaagagtggtgtacaaagtgtgtatkgagttgtag 542
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1849 tacatgaatgggggggtcaaccagtgaagagtggtgtacaaagtgtgtatggagttgtag 1790
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4280
Number of Sequences: 1807
Number of extensions: 4280
Number of successful extensions: 90
Number of sequences better than 1.0e-20: 1
length of query: 542
length of database: 10,358,551
effective HSP length: 16
effective length of query: 526
effective length of database: 10,329,639
effective search space: 5433390114
effective search space used: 5433390114
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)